Protein ZmYAB2
ZmYAB2 is a protein in the C2C2-YABBY family.
Information
TF Name: ZmYAB2
Species: Maize
TF Family: C2C2-YABBY
Gene Name(Synonym): IFA1
Uniprot ID: B6T6E1
Subgenome: 1

Protein ZmYAB2

ZmYAB2 is a protein in the C2C2-YABBY family.

Overview of domains present in v5 transcripts
PF04690
Zm00001eb008680_T005
Zm00001eb008680_T001
Zm00001eb008680_T002
Zm00001eb008680_T003
Zm00001eb008680_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d028216DAPseq no logo sequence fimo position
Zm00001d028216DAPseq no logo sequence fimo position
Zm00001d028216ChIPseq no logo sequence fimo position
Zm00001d028216PChIPseq no logo sequence fimo position

Interactions where ZmYAB2 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmYAB2 is the target  
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There are 42 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb008680_T005 from maize genome v5

Amino Acid Sequence
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MDMVSQSEHLCYVRCTYCNTVLALQVGVPCKRLMDTVTVKCGHCNNLSYLSPRPPMVQPLSPTDHPLGPFQCQGPCNDCR
RNQPLPLASPSSTELSPRMPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSTAAST
ETSNSAPAEPRVVPTPQLTEPRFDLEDRAKGQVIESFDIFKHIERSI

MDMVSQSEHLCYVRCTYCNTVLALQVGVPCKRLMDTVTVKCGHCNNLSYLSPRPPMVQPLSPTDHPLGPFQCQGPCNDCR
RNQPLPLASPSSTELSPRMPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSTAAST
ETSNSAPAEPRVVPTPQLTEPRFDLEDRAKGQVIESFDIFKHIERSI

MDMVSQSEHLCYVRCTYCNTVLALQVGVPCKRLMDTVTVKCGHCNNLSYLSPRPPMVQPLSPTDHPLGPFQCQGPCNDCR
RNQPLPLASPSSTELSPRMPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSTAAST
ETSNSAPAEPRVVPTPQLTEPRFDLEDRAKGQVIESFDIFKHIERSI

MDMVSQSEHLCYVRCTYCNTVLALQVGVPCKRLMDTVTVKCGHCNNLSYLSPRPPMVQPLSPTDHPLGPFQCQGPCNDCR
RNQPLPLASPSSTELSPRMPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSTAAST
ETSNSAPAEPRVVPTPQLTEPRFDLEDRAKGQVIESFDIFKHIERSI

MDMVSQSEHLCYVRCTYCNTVLALQVGVPCKRLMDTVTVKCGHCNNLSYLSPRPPMVQPLSPTDHPLGPFQCQGPCNDCR
RNQPLPLASPSSTELSPRMPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSTAAST
ETSNSAPAEPRVVPTPQLTEPRFDLEDRAKGQVIESFDIFKHIERSI

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF04690
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Nucleotide Sequence
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GTCTGCCCGTGGCGTGCTCCACTGA...

GRMZM2G088309_T01 from maize genome v3


Related TFome: pUT1437

Amino Acid Sequence
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MDMVSQSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLSYLSPRPPMVQPLSPTDHPLGPFQCQGPCNDCRRN
QPLPLASPSSTELSPRMPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSTAASTET
SNSAPAEPRVVPTPQLTEPRFDLEDRAKGQVIESFDIFKHIERSI

Nucleotide Sequence
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CCAGCTCTCCGCCCGATCGCTGCGT...

GRMZM2G088309_T02 from maize genome v3

Amino Acid Sequence
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MDMVSQSEHLCYVRCTYCNTVLALQVGVPCKRLMDTVTVKCGHCNNLSYLSPRPPMVQPLSPTDHPLGPFQCQGPCNDCR
RNQPLPLASPSSTELSPRMPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSTAAST
ETSNSAPAEPRVVPTPQLTEPRFDLEDRAKGQVIESFDIFKHIERSI

Nucleotide Sequence
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CCAGCTCTCCGCCCGATCGCTGCGT...

Zm00001d028216_T001 from maize genome v4

Amino Acid Sequence
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MDMVSQSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLSYLSPRPPMVQPLSPTDHPLGPFQCQGPCNDCRRN
QPLPLASPSSTELSPRMPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSTAASTET
SNSAPAEPRVVPTPQLTEPRFDLEDRAKGQVIESFDIFKHIERSI

Nucleotide Sequence
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AACTCTCTCTCTCTCTCTCTCTATC...

Zm00001d028216_T002 from maize genome v4

Amino Acid Sequence
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MSLFLLRCISNYSCVVVNLSITLLFIFEILVYSHVLLSNIFQDFGIYSVKRKLCVWIVIPYCLLDVQMYLNRIFEKSFIL
MPCKQQKYMNGMEDTKATFGSISHRLIFSPYPVWL

Nucleotide Sequence
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GACAGCCAGACACGCGCTGCTTTCT...

Zm00001eb008680_T001 from maize genome v5

Amino Acid Sequence
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MDMVSQSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLSYLSPRPPMVQPLSPTDHPLGPFQGPCNDCRRNQP
LPLASPSSTELSPRMPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSTAASTETSN
SAPAEPRVVPTPQLTEPRFDLEDRAKGQVIESFDIFKHIERSI

Nucleotide Sequence
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CGGACCCATGTGTGCGGGGGGCCCA...

Zm00001eb008680_T002 from maize genome v5

Amino Acid Sequence
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MDMVSQSEHLCYVRCTYCNTVLALQVGVPCKRLMDTVTVKCGHCNNLSYLSPRPPMVQPLSPTDHPLGPFQGPCNDCRRN
QPLPLASPSSTELSPRMPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSTAASTET
SNSAPAEPRVVPTPQLTEPRFDLEDRAKGQVIESFDIFKHIERSI

Nucleotide Sequence
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CGGACCCATGTGTGCGGGGGGCCCA...

Zm00001eb008680_T003 from maize genome v5

Amino Acid Sequence
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MDMVSQSEHLCYVRCTYCNTVLALQVGVPCKRLMDTVTVKCGHCNNLSYLSPRPPMVQPLSPTDHPLGPFQGPCNDCRRN
QPLPLASPSSTELSPRMPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSTAASTET
SNSAPAEPRVVPTPQLTEPRFDLEGQGASH

Nucleotide Sequence
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CGGACCCATGTGTGCGGGGGGCCCA...

Zm00001eb008680_T004 from maize genome v5

Amino Acid Sequence
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MDMVSQSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLSYLSPRPPMVQPLSPTDHPLGPFQCQGPCNDCRRN
QPLPLASPSSTELSPRMPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSTAASTET
SNSAPAEPRVVPTPQLTEPRFDLEDRAKGQVIESFDIFKHIERSI

Nucleotide Sequence
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AACTCTCTCTCTCTCTCTCTCTATC...


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